Fusion event
HIV-chr6 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
End
74230954/73521231 (Hg38)
Nearest miRNA
hsa-mir-10398/Upstream/553478; hsa-mir-10524/Downstream/1907176;
Nearest cancer related gene
Upstream sequence
CCACCTTCTCTAGGCACCGGTTCAATTGCCGACCCCTCCCCCCAACTTCTCGGGGACTGTGGGCGATGTGCGCTCTGCCCACTGACGGGCACCGGAGCCT
Downstream sequence
CACGCATGCTCTTCTCCACCTCAGTGATGACGAGAGCGGGCGGGTGAGGGGGCGGGAACGCAGCGATCTCTGGGTTCTACGTTAGTGGGAGTTTAACGAC
Sunshine, S., et al. HIV Integration Site Analysis of Cellular Models of HIV Latency with a Probe-Enriched Next-Generation Sequencing Assay. J Virol,2016, 90(9): 4511-4519.