Fusion event
HIV-XAF1 integration
Detection method
QiaQuick PCR and Sequencing
Disease
HIV-infected disease (HID)
Reference genome
Not given
End
6666839/6762880 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-1253/Upstream/107371; hsa-mir-10226/Downstream/254735;
Nearest cancer related gene
Target sequence
TTTACCTTTCTTAACACTTCAGTGCTTAAAACTACAGAATATCAAAACTAAAGAAACCATAGAGACGATCCAGCTTTTCGCTCTTTTCTTTTTCTTTTTACTATTGTGGTAAACCACGTATAATGTAAAATTTGCCATCACTATAGAGACATTTGGTACATTCACAATGTTGTGCAATCTGGTTCTAGAATATTTTCATCATTCCAAAAAGAAATCCTATACCCATTAGCAGGTACTGTACATTCCCTCATCTTC
Wagner, T. A., et al. Proliferation of cells with HIV integrated into cancer genes contributes to persistent infection. Science,2014, 345(6196): 570-573.