Basic Information
VIS ID
TVIS30001134
Fusion event
HIV-chr10 integration
Validated
Yes
Detection method
QiaQuick PCR and Sequencing
Data source
Curated
Sample type
Disease
HIV-infected disease (HID)
Quality evaluation
Good
Reported year
2014
PubMed ID
Virus Sequence
Virus name
HIV
Reference genome
Not given
Host Sequence
Chromosome
chr10
Cytoband
q11.21
Reference genome
End
42393772/41847058 (Hg38)
Orient
-
Nearest miRNA
hsa-mir-1265/Upstream/6205806; hsa-mir-107/Downstream/1150505;
Target sequence
CATTCGATTCCATTCGATGATGATTTCAATCAATTTTATTCGATGATTCCATTCGAATCCATCCGATGATGAGTCCATCCATTTCAATTTCATGATAATTCCATTCGTTTCAATTCGATGGTGTTTCCATTCGATTCATTCGATGTTGATTCTATTAGCTTCCGTTGGATGATGATTCCATTCGGGTCCATTCGATGATGATCACACTGGATTTCATTCCATAATTCTATTCGATTCCACTCGATGATGATTCCA
Reference
Wagner, T. A., et al. Proliferation of cells with HIV integrated into cancer genes contributes to persistent infection. Science,2014, 345(6196): 570-573.
Curate