Fusion event
HIV-DPYD integration
Detection method
QiaQuick PCR and Sequencing
Disease
HIV-infected disease (HID)
Reference genome
Not given
End
98188472/97722078 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-101-1/Upstream/3178299; hsa-mir-11399/Downstream/323164;
Target sequence
CTCAGGTTATCCTCCATTTAACTAAATTAAAAGCAGCCAGAGCTTTCATTATTTTTGGAACATATTATTTTCTGAAAAAAGAATGAATAATAAGCTGAATATTTGGGAGAATGTTTTCCTCTAATCAAAAGGAAGAATTGCATCTGACCAGTACTCCTGAAAACAATCAAGTACATCAAAAACAAGAAAAGTCTGGCAAATTTTAACAGACAAGAGAAGCCTAAGGACACATGACAAATAAATGTATTGTGGTGA
Wagner, T. A., et al. Proliferation of cells with HIV integrated into cancer genes contributes to persistent infection. Science,2014, 345(6196): 570-573.