Fusion event
HIV-chr1 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
198549052/198579922 (Hg38)
Nearest miRNA
hsa-mir-101-1/Upstream/1997441; hsa-mir-1182/Downstream/278951;
Upstream sequence
ttaccagcaaaactatgtggacctaaagttttcttttttggggataattttttCCCATttttttattcagataaaatatgcataacataaagtttattat
Downstream sequence
attaaccttttttCTAtttttaaaaattatttttatagactttatttttagagccggtttagattcatagcaaaattgtacaggaggtatggagatttcc
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.