Fusion event
HIV-SETDB2 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
50037765/49463629 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-2276/Upstream/5267429; hsa-mir-1267/Downstream/532786;
Upstream sequence
gtacagaggcagaacaaagacagttaatcaaattgtgacaggttcataactcagcattacacgtttgctatgcagcccagatgtctgttatctaggtttt
Downstream sequence
tctctagtgcctagcacagcttattccatgaccttcactgtggtgcccaggtggccataattcaggcctgctcagatggctcatgaccttcactccacca
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.