Fusion event
HIV-AKAP13 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
86242366/85699135 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-10393/Upstream/318473; hsa-mir-11181/Downstream/71361;
Nearest cancer related gene
Upstream sequence
ATTTGCAGGTGCAGACAGAGCTCTCcaagacattttgatgagttggaaagtcagtaaatagaacaatatatacagcatgatcctagtttatggaaaacaa
Downstream sequence
acagtttatataaatttacaaaaatatgccagggatggtggctcacagctgtaatccctgcactttgggaggctgagacgggcagaacacctgaggtcag
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.