Fusion event
HIV-chr16 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
29030002/29018681 (Hg38)
Nearest miRNA
hsa-mir-1225/Upstream/60020; hsa-mir-11401/Downstream/580498;
Upstream sequence
tttgagacagggtctcaccctgtcacccaggctagagtgcagtggtgggtccaggcaattctcctgcctcagcctcctgagtacctgggactacaggtgc
Downstream sequence
tcgccaccacgcctggctaatttttgtatttttagtagtgacggggtttcaccacgttagccaggctagtctcaaactcctgacctcaagtgatccacaa
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.