Fusion event
HIV-NCOR1 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
16102845/16199531 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-1253/Upstream/947835; hsa-mir-10226/Downstream/82483;
Upstream sequence
AAATGAAAGCTAAATGTACAAAAGATACAATGGAGAAACATTCCGATCTAGTAAGAATGGGAGACCTAGGATTCATCTTTTCAGTCTCCCCCTGCCCTTT
Downstream sequence
CCCATCCTTCCCTCCACCCTTCACTCTAGTCCTGGCTCACTAAGATACCTCGGCAGAATACTTTACATTTGAAACCCACTGAAATAAAAGAATCTAGTTT
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.