Fusion event
HIV-NSF integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
44723791/46646425 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-1180/Upstream/1170990; hsa-mir-10226/Downstream/326592;
Upstream sequence
aaccctgtctctactaaaaacagaaaaaattagccgggcgtggtcgcgggcgcttgtagtcccggctcctcgggaggctgaggcaggaggatgtgtgaac
Downstream sequence
ccgggaggcggagcttgcagtgagccgagatcgcaccactgcactccagcctgggcgacagagcgagactccatctcaaaaaaaaaaaaaaaaaaaaaaa
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.