Fusion event
HIV-MIR1268A integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
3976289/3976291 (Hg38)
Location type
ncRNA_intronic
Nearest miRNA
hsa-mir-1227/Upstream/14779; hsa-let-7e/Downstream/469687;
Upstream sequence
CTGCGGGCCATGTACCCAAATAAACCTCTTAATGCGTTTGTTAAAATTAGTTTGGACATCTGAGTTTCCCTCTGAAGAAATGGAAAAAGTGTTGGGTGTC
Downstream sequence
CCATCCCGCCTCCCCCTCCCCGACCGGCCCATTAAGTCCCTACTAAGAGGGCGTGTCTGCTGCCTCCGGACTCTGGAAATAAATATTGAAAGAAACGGCA
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.