Fusion event
HIV-chr19 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
39357790/38867150 (Hg38)
Nearest miRNA
hsa-mir-10395/Upstream/3521523; hsa-let-7e/Downstream/542473;
Upstream sequence
gtatttttagtagagacggggtttcaccatgttggccaggctggtctcgaactcctgacctcgtgacccacctgcctcagcctcccaaagtgttgggatt
Downstream sequence
acaagcgtgagccaccgcacccggccatctgtggtctttttgatggcagctctagccgactaGCCTatctccttagctcaatggtcaaagttagctttac
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.