Fusion event
HIV-TIAM1 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
32521542/31149224 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-let-7c/Upstream/773846; hsa-mir-3197/Downstream/2401438;
Upstream sequence
ATGGAATGGAGACAATCAGATTGTGCCATAAACAGCAAAGTGAAGGTATATGAAGAGGGTCCCACTTATGTGGAATTGAGAAGAGTGATGGTTGAGTATG
Downstream sequence
GAAGTACCggtttggtatccttgatccaaaatacttgtgaccagaagtacttcagatttcatattttttcatatttgggaatatctgcattatatttact
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.