Fusion event
HIV-ZCCHC7 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
37137137/37137140 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-101-2/Upstream/243609; hsa-let-7a-1/Downstream/3791870;
Upstream sequence
AATCTTTCCAAATATTATTTACTGGGTGCTGACAACGTACAAGCCACTGTACCATTAAGGTATTGGGATTCAAAAATTGCCATGTACTTTTTGCCTTTAG
Downstream sequence
AAATCCTAAAATGCATGACAGTATGGAAAGTTCACTGTAAAACCAGAGTTAAATGCATTTCTACAAATATATGAGATGCTCCAGCAGAATACGTAATCAT
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.