Fusion event
HIV-chr9 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
140447670/137553218 (Hg38)
Nearest miRNA
hsa-let-7a-1/Upstream/103132; hsa-mir-602/Downstream/285201;
Upstream sequence
ctctactaaaaatacaaaaattagccaggcgtggtggcgtgcgactgtagtcccagctactccaaaggcaagagaatcgcttaaacccaggaggcagagc
Downstream sequence
ttgcagtgagtcgagatcgcaccactgcactccagcctgggtaacagagtgagactccgtctcaaaaaagggataaaaCTGCATGTTTTTTTGCTTGTAG
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.