Fusion event
HIV-chrX integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
43929668/44070422 (Hg38)
Nearest miRNA
hsa-mir-1587/Upstream/4232809; hsa-let-7f-2/Downstream/1675735;
Upstream sequence
TCACTAAATTGGTAAAATGTAAATTGATTCTGCTTCCACCTAAGAAGGTATGATCCTAATATGTACATAACACATTTAGTATGATATTAGTTAAGTAACT
Downstream sequence
TGCTGATCTATTTCCATTGAATGTTTTGTGATCAAAACATGGAAGTACAACCACgttctgctgtgagtagacatatgcaaacctacccctaaaggaagct
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.