Fusion event
HIV-PPP1R3F integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
49138644/49282181 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-1587/Upstream/1694676; hsa-let-7f-2/Downstream/720967;
Upstream sequence
CCTTGGAGTAGACAGCCCAATAGGAGGCTCACAGTGTGACTATTGCTGGGCTGGGTGGTGGGGCCCACTAGCTCTGGGTCCTCCCTGGGTTGGAGGGAGG
Downstream sequence
GCACAAAACTCAGAACCTGATGGGGGAGGGGGAGAATGCAGTTACTCAGCTGGGCTTGTAGAAATGTCatttgttaatttagcaaaaatttatggagtgc
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.