Fusion event
HIV-chr17 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
79838453/81880577 (Hg38)
Nearest miRNA
hsa-mir-10226/Upstream/186708; hsa-mir-4525/Downstream/356091;
Upstream sequence
aaacttggaagtgaaacagacattcacttagtctggaagtatctccccaaggtatttatggatgacaaagggaaaacagtaactatgtaggggagaagcc
Downstream sequence
ccggcagccgctgccaccacctgaactaacaggaccaggagttggacagactgacattgcatatctccactatgcattgagaagatgacatcccagctgt
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.