Fusion event
HIV-EIF3B integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
2397523/2357888 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-339/Upstream/100311; hsa-mir-10399/Downstream/169186;
Upstream sequence
CCTTCCTACGTGTGGGCAGTTTCTCCTAGACTAGACGCTTTGAGCTTGTGGGAAGGAGTACCCAATTTGTGTAAAAGTTGAGCTTTTTATTGCAGCCTTA
Downstream sequence
TAAATTCAGATCAGGCTTGTCAGGCTATTTAATTGTATGGTAAGTGCTTTAGAAGTTACCCTAGGATTTGACTAGTTTCCATAGCAGGGTGTCCGGCACT
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.