Fusion event
HIV-CIZ1 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
130938355/128176076 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-let-7a-1/Upstream/306581; hsa-mir-12126/Downstream/68645;
Nearest cancer related gene
Upstream sequence
ACAGGGAAACCCTAACCTCCAACCACAAAAGAACCTGATCCTCAGCCTTGTCACCCCACAGCGGGGTTAGCACACATGCCACAGGGGGCAAGAGTCTGTG
Downstream sequence
CCACAACCTGTCCTCTCCCACAGGGATGGTCATACTGTTCCTGCCTAGAGGGAACCTTAAGAGAATGTCATGAATTCCTGTACTATATCCGTCACCAAGC
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.