Fusion event
HIV-YY1AP1 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
155646174/155676383 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-101-1/Upstream/329938; hsa-mir-1182/Downstream/274890;
Nearest cancer related gene
Upstream sequence
AATTTCAGAATAGATTACTGAGGACTCTTTGAAATCTGTAATTCCGAATACCATTAGGGTCCTTATGTGCTGTCTTCCCTGAGCCACAGGACATGAACAT
Downstream sequence
GATGACTTCTCAAGCTCCTAACTGATGTGAAGATACTACGGTTTTAATACGTAGTAAGGTAACTATCTCTGACATTTACAAAGCTGCTAATTTTAGATTA
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.