Fusion event
HIV-chr11 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
64548093/64780621 (Hg38)
Nearest miRNA
hsa-mir-1237/Upstream/411918; hsa-let-7a-2/Downstream/97902;
Upstream sequence
ggacatgtctcagaagaacaaatccaaatagccaagaaatatgaaagggtgcacaaccccTCTGCTGTGGTTTTTTAAAATAAATAGAAAAGATGTTGGA
Downstream sequence
ACCCCCACAACACTTGAAACCTGGAGAGAGAGGTGACTGTGATCTCAGCCATgtatggttataattttttctgagataataaattagacctgcttgtttt
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.