Fusion event
HIV-CARD16 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
104911149/105040422 (Hg38)
Nearest miRNA
hsa-mir-10392/Upstream/1190442; hsa-let-7a-2/Downstream/6307335;
Upstream sequence
ATATTTTTTTGTTGATTTCTGGCTGGACACACTCCACAAATTTGTAAAAATTTTGGTAAGAGGAAGTTGTTCTTATAGTGACTGAGTTGTAATTACCAAC
Downstream sequence
CACCCAAGTTGGATGGGGAATTGTAGACAGAGTGGATATAATTTATAGGAACCAAATTGTTGACTTAAATGTGTACTTGGAAAATAGAATTACAAAGGTA
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.