Fusion event
HIV-chr13 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
48639212/48065076 (Hg38)
Nearest miRNA
hsa-mir-2276/Upstream/3868876; hsa-mir-1267/Downstream/1931339;
Upstream sequence
ctattatgaataatgcttctataaatacttgtgtacaagtttttgcacagatgtgttttcaagtctcttgggtatataactaagaagtggaattgctggg
Downstream sequence
tcataaagtttaactgtttttagcttttttacatatatatttttgagacagagtcttgctctgttgcccaggctggagtgcagtagcatgatcttggctc
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.