Fusion event
HIV-PIAS1 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
68439223/68146885 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-10393/Upstream/1649851; hsa-mir-11181/Downstream/654965;
Nearest cancer related gene
Upstream sequence
GTAAAATGAGCTGCAAAAGGATTTATTTTTGTCTCACAATGAATTTTCAACATGTTTCCATTTGaaaaatgggattatgaagtatccagtgttttataac
Downstream sequence
ctggcccttttactccacaattgatcataaatgtcctcctgtatcatcacatgttcttctgcattattttaagtgatgatatcatattccaatatgagta
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.