Fusion event
HIV-SKAP1 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
46495154/48417792 (Hg38)
Nearest miRNA
hsa-mir-10226/Upstream/261281; hsa-mir-10a/Downstream/162046;
Upstream sequence
tgagattgtgccatttcactacagcctgagtgacagagcgagacttcgtctcaaaaaaaaaaaaaaaaagaaaaagaaaattctgcatatgtacactaag
Downstream sequence
atacacagataaagatgttttctacagcagtgtggatatataaaatatttggaaacaccttaaacatccatcaataggacaattgctaaataaattgtta
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.