Fusion event
HIV-ZGPAT integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
62351013/63719661 (Hg38)
Nearest miRNA
hsa-mir-1-1/Upstream/432795; hsa-mir-1914/Downstream/199788;
Upstream sequence
tggtgaaattttcactacagttactgtactttttagctccaaagtttctatttggtttctttctgtagtaattatcactttactagtattctctatttgg
Downstream sequence
ttagacatggttcttttgttttcctttagttcattatccatggtttcctttatttttaaatttctttttatttagttattaattttttttttttttgaag
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.