Fusion event
HIV-RASA2 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
141228256/141509414 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-let-7g/Upstream/7071508; hsa-mir-1224/Downstream/10056462;
Upstream sequence
TAATGTCAGGTTCATTGGATTCTTCAAAATAACCTCATTGTCTCTCTCTTAAGAGGGAGAGGGAAGTAGAATATGTGTAAATTTATATAATGTTGTTTTC
Downstream sequence
TCAAAACTGCACCTATGTGAATGAAACAGAAACATGTTCAGGGACAGTTAGTGTTTCAAATTCTCCCAATTAGATATGGAGCATATTTATTATGGAGCAT
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.