Fusion event
HIV-HTT integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
3207362/3205635 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-4800/Upstream/955479; hsa-mir-12113/Downstream/2717640;
Upstream sequence
GATACTAATTTTATAAGTTAATAAagtttgatcatcccaaatccaaaaatctgaaatccaaaatgctccaaattctgaagctttttgagtgctgacatta
Downstream sequence
tgttcaaaggaaatgttcattggaaggtttcagattttcggatttagggagctcaacaaataagtataatgcacatatttcaaaacctgaaaaaaatcct
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.