Fusion event
HIV-chr4 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
131962393/131041238 (Hg38)
Nearest miRNA
hsa-mir-12113/Upstream/5533931; hsa-mir-1305/Downstream/12302222;
Upstream sequence
CTCCCTAATGCAGGATACTTTAATTTTAGCTCTCATAACTGTGTGACTTATATGTATAGATTGAACAACTATAAATTAATACATTAGATAATATTGTATA
Downstream sequence
ACTAAAGTCAGATTTATAAAGCAGTGTATGCATATATTCTATAGAGATATAGATATGATTAAGTTGTCCTAAAAATAGTATAGCAGTCTTCATATATATC
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.