Fusion event
HIV-chr5 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
50830313/51534479 (Hg38)
Nearest miRNA
hsa-mir-10397/Upstream/12976918; hsa-mir-103a-1/Downstream/2417025;
Upstream sequence
atctcttataatccttcttatttctgtggtatcagtggtaatgtcttccctttcatttatgaccttatttattagtcttctctcttttttcttagtccag
Downstream sequence
ctaagggtttgtcaattttgtttatcttttcagaaaacttactcttgattttgttgatttaattgttttgtaagtctctactgtatttatttttgttctg
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.