Fusion event
HIV-RANBP9 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
13654750/13654518 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-3691/Upstream/3214724; hsa-mir-10398/Downstream/2487038;
Nearest cancer related gene
Upstream sequence
AATAAAACCTTTCTATTTTTCCTTATATAGTAAACAAATATACATTCTGAAAATCTTCCATGAGACAGAAACTAAAGATGTATCAAGTTTTGGGCACAGA
Downstream sequence
TTATCCACTTAGGAAGTATAAGGGAATAGTAACTAAATATTTAACAGTATTTTATCTTGGAAGATGCCAGAACCTAGACcagaggtaggcaaagctttcc
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.