Fusion event
HIV-chr6 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
84175686/83465967 (Hg38)
Nearest miRNA
hsa-mir-10398/Upstream/4926658; hsa-mir-1202/Downstream/6846775;
Upstream sequence
gatattggagacattaatcttgtaagccacactttcatcatctatgaaatgtggctgaatatttaccttatagggctttttgtaagtactaaatgtgaag
Downstream sequence
tgcttagaacaacatttggcaatactgggcatcaataaatggtagTGAGATACAACATTATTGCCACCCTGTGATGAGTTCTCCCTTGTACCTCTCACTC
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.