Fusion event
HIV-chr6 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
146913341/146592205 (Hg38)
Nearest miRNA
hsa-mir-10398/Upstream/5908322; hsa-mir-1202/Downstream/4510470;
Upstream sequence
CATTTTGTAAATATCAGTCCTAGTTCCTTGTAGGTTCATAACccacaagattatgagttctttggggataaaaaccaaatcttagtcatctttttaGAAA
Downstream sequence
TACACAAGGCATAAAATTAACCTCCAGATAAACTAAACATCCAGATAAACACAATTACATTAAAGAAAAATTAATAGCTGTAACAGATGGTACAagcatc
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.