Fusion event
HIV-chr6 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
149478799/149157663 (Hg38)
Nearest miRNA
hsa-mir-10398/Upstream/8473780; hsa-mir-1202/Downstream/1945012;
Upstream sequence
TATATCAGGTTTAGCCTTTGCCCTTTGACAATATCAGTCTTAAGAGCACTGACTTGAAGAAGTGATCTAAAATAGTATCTTAGAGTTATGCTAATTTGAA
Downstream sequence
CTACCCCAGTCAGAAAGATATGGAAAAGTGAGAAAGAAGGAAAATGTTTTAAAGGCCttttctttgtctttctctctctctttttttttttttttttttt
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.