Fusion event
HIV-SCAF8 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
155067973/154746839 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-10398/Upstream/3644063; hsa-mir-1202/Downstream/106521;
Upstream sequence
attacttggttagttttctcccccacttaaagtggttttgctattaatttgaaatagagttaggttcaagtttttctgtttatattccattttgactttt
Downstream sequence
ttcctctttcatccttgtttgctatttttttagtatgtgaaacattaAAGATAAATTAACTTTAATCATTTACTTTTCCTAGCTTCAACGTCATAACTAC
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.