Fusion event
HIV-STAG3 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
99793326/100195703 (Hg38)
Nearest miRNA
hsa-mir-10525/Upstream/39034; hsa-mir-10399/Downstream/160948;
Upstream sequence
AATAAAGCATTGCTGAGTATTTTCCTGCTCTGGCTTTGCCCCAGATCTGCCCCAACTCCTCATCTTTCTGGGGTTGGAGACTTGAGGATAAGAGCAGAGA
Downstream sequence
ATAGAAAGGCGGGGCTTTTCTGAGGGATGCCTGCTGCCTGGTGAGCCTTCTCCTGGCCCAGCCTGCTGTCTCACTGTGCGAAGGGCAGGGGAGTTTTATA
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.