Fusion event
HIV-chr8 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
29331237/29473720 (Hg38)
Nearest miRNA
hsa-mir-124-1/Upstream/968538; hsa-mir-10400/Downstream/483552;
Upstream sequence
TTCCATGGCGAGAGGTTTTACAGAGTAAATCTTTGATATTTGGGAAAAATACTTACTAGAGTATTTACTAGTACTTACTAGATACTTTGGAAATCCCCAC
Downstream sequence
ACATACAGATACCGTTATAACAGAATTTAATGTTAGAAATTTGGGTCAGAAGAAAAATATTAGGGCCCCAGCAAAGTATGTGAgttgggcatttagcaag
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.