Fusion event
HIV-UHRF2 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
6460591/6460591 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-101-2/Upstream/452687; hsa-let-7a-1/Downstream/12112715;
Nearest cancer related gene
Upstream sequence
CAAATTAGGTTTTTCTGTACATTGCATAAAACTTTAGTTGTCTTTGGTAATCATAAGCCATATGGTTTTCTCTCTCCTCAGATACCCAGAAAGCGGTACT
Downstream sequence
CTAGAAATGAATGTCAAGGATCTTAGACCACGAGCTAGAACCATTTTGAAATGGAATGAACTAAATGTTGGTGATGTGGTAATGGTTAATTATAATGTAG
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.