Fusion event
HIV-LOC105376335 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
86538436/83923521 (Hg38)
Nearest miRNA
hsa-mir-101-2/Upstream/13113437; hsa-let-7a-1/Downstream/46227;
Upstream sequence
gccaggtgtggctgagtatgcctgcagttccagttactctggaggtggaggtgagagaatggtttgagcctgggaggtcaaggctgcagtgagctgttgt
Downstream sequence
tgcaccatggcattgcagcctgggtgacagaatgagactctacctcaaaaaaataataaaTAATACATAATTTTTAAAATTCTAAGATTTCATTTATACA
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.