Fusion event
HIV-chrX integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
95560699/96305700 (Hg38)
Nearest miRNA
hsa-let-7f-2/Upstream/1242474; hsa-mir-105-1/Downstream/10334114;
Upstream sequence
ttaatcagagaactgagtccatttacattcagtattattattgataagggaagacttactgctgccattttgtttcttgttttctgattgctttgtaact
Downstream sequence
cctcgcttcctttctccctttcttactgtcatcttttgtagttaattgttctctgatagtatgtttaatttgttggtttttattagtttattataggttt
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.