Fusion event
HIV-MPHOSPH9 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
123681212/123196665 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-let-7i/Upstream/185937; hsa-mir-3612/Downstream/168099;
Upstream sequence
TGTTCAGAAAGAAAAAAAGTTACCTGTAAAAAAATAAAATTTGGTAATGCGTGGGGAAAAAAGTAATTTTAGCATAAAAAGTTTATGcacttttagttat
Downstream sequence
atacccaaggaaactaaaaacttacgtggcacataaaatcttgtagacaaacattcatagcaatataatttaaatagccagaaagtatataaacattacc
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.