Fusion event
HIV-MYOZ2 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
120083475/119162320 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-12113/Upstream/4505466; hsa-mir-1305/Downstream/6344939;
Upstream sequence
accccaagcagcaagtaactagatccatagtcctggagcaaagagtgtgaaaggagaaagcaggcggtgaggctggacgggcttaagggccacatGGGTC
Downstream sequence
ATGCTGAGTGGTTGCGATTTTGTCCTGGGAGGCATTAGGGTCCCCTGAGCAGGGGAAGAGCTGGCCAGTTAGGAAGGTCTCCTGGGGCAGCAGTGTGGAG
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.