Fusion event
HIV-LOC105375586 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
155010776/155219066 (Hg38)
Nearest miRNA
hsa-mir-10399/Upstream/3785427; hsa-mir-153-2/Downstream/2355270;
Upstream sequence
CCGAAGCTTCTCCAGCCCCACCCCACTTACCCCCATGATGTGAGCGCTTGGACGCACCGTCCCAGTGACCTGCCTCCACGGTAAAAGAGGGCCTGAATGG
Downstream sequence
GGGTTCTTCAGTGCGGGGATCAGGGGCTGATTTCAGAATCTAACGACTGTCATTATGCCGCATACACAGAAAAATGAACACGAGAGCTACAATTTACATA
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.