Fusion event
HIV-LOC105375933 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
86018607/85106372 (Hg38)
Nearest miRNA
hsa-mir-12123/Upstream/4864899; hsa-mir-10400/Downstream/6099113;
Upstream sequence
atctcttgctagacttgggaagttttcatatagtattttgttgaaccatttttccaactctattgttttctctttgccttctgagactccaaaattttga
Downstream sequence
atatttggtcactttatggtgtcctacatgtcatgtgggttttgctcattttttaaaacatcttttttatttttgtctatatgagttatttcaaaagGAA
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.