Fusion event
HIV-C9orf85 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
74541448/71926532 (Hg38)
miRNAs that regulate target gene
Nearest miRNA
hsa-mir-101-2/Upstream/1116448; hsa-let-7a-1/Downstream/12043216;
Upstream sequence
AATATGAGCTAAGCAGACTAAACTTTTTAGGAAAATAGAAACCATGAAACGCATGCTAGAAACCCTCCCATGCCCAGTTAAGAGAGGTAATGTAAGTCAC
Downstream sequence
AGAAGAGTACTTTTAAAAACCCGAAACCCGAAGTATCCTAAATTATATCCTTAATGATTCAAATAGCTTTCAAAGTCCAAAAACCAGCAAACACTGCTGT
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.