Fusion event
HIV-MIR3134 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
114984552/112222272 (Hg38)
Location type
ncRNA_intronic
Nearest miRNA
hsa-let-7a-1/Upstream/290103; hsa-mir-12126/Downstream/1987162;
Upstream sequence
CAAAAAAATGACCCTTTTGACAAATTCTGCTTTAAAAAATTCTGATCAACAATTGAAGAAATAATAGCAAAGTTTCTTATTAAAAAGAAACAATTTTACA
Downstream sequence
TTATACAATCACTGAAGCAACATTAAAATGTACTCTTACATTCAATGAAAAAGAGAGGGACAGAGTATGAGAAATAACCCACCTTCTCATACTCCAAATA
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.