Fusion event
HIV-chr1 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
22548188/22221695 (Hg38)
Nearest miRNA
hsa-mir-12136/Upstream/1233263; hsa-mir-101-1/Downstream/44544;
Upstream sequence
GTCCCAGCCCTGTCTCTCCACTGCAGTGGCCAGCCTGCAGCGCTCACCTATGTCTGTCAAAATGCATTGTGTGCACATGTGAGGGACACCACATCCCTGT
Downstream sequence
CACTTACCCCAGACCTGATCACTGCCTTCCCCACATCTGTGCACACTCACAGGGTCAGGCATGCCCTCAATGGCTCCCAAGCACTGGTGTGCTGCAGCAA
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.