Fusion event
HIV-chr11 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
56048248/56280772 (Hg38)
Nearest miRNA
hsa-mir-129-2/Upstream/8183914; hsa-let-7a-2/Downstream/463101;
Upstream sequence
attacttactggctaaacagagaagtatctgtgtagctgctggcacttgtggcctatggagaaatatatcacatcaggtcttatagaggggattaacaaa
Downstream sequence
gagactgcttagtaaagtgagtagactttttagctcattcttttatctttttgattttaggtggtttggtttagggggaacctgggtaaggagcatactc
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.