Fusion event
HIV-chr14 integration
Detection method
QiaQuick PCR and Sequencing
Data source
download(RID)
Disease
HIV-infected disease (HID)
Quality evaluation
Normal
Reference genome
Not given
End
41852703/41383500 (Hg38)
Nearest miRNA
hsa-mir-208a/Upstream/4431109; hsa-mir-1185-1/Downstream/6377495;
Upstream sequence
ACTCATTTTAAAAATATTACTTGAATGTAAGTCATGTTTGGTCCATGTTGGTACATTAGCAACATGGAAACTGAACAAAACATTCCCAAAGACATGCATA
Downstream sequence
CAGATCTCACCCTGCTACTTCCAAGAACCTCCTTTATCTTTGAATATAAACCTACCCAATACATTTGTGGTTGCAGTACACTTTCTTCACAGGTTTTATG
Sherrill-Mix, S., et al. HIV latency and integration site placement in five cell-based models.2013, Retrovirology 10: 90.